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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887651.1_cds_XP_016442057.1_37359
CDS Infomation

[gene=LOC107767541] [db_xref=GeneID:107767541] [protein=pectin acetylesterase 8-like] [protein_id=XP_016442057.1] [location=join(117811..117931,118372..118454,118929..119058,119145..119224,119345..119431,119520..119644,119750..119810,119944..119997,120077..120154,120746..120851,121186..121331,121469..121606)] [gbkey=CDS]
Sequence

ATGGTAAAAAGGGCAATGCAACAATGGCTACGTGCAATAATCACTTTGCTGATTCTTTTA
CTAACCGAAGGGCACCCTGTTGATATTACTTATCTTCAGAGTGCTGTGGCAAAAGGAGCT
GTATGTTTGGATGGGAGTCCACCAGCATACCATTTTGATAAGGGATTTGGAGCAGGTGTT
AACAATTGGTTTATCCAACTTGAGGGAGGAGCATGGTGCAACAATGCCACGACTTGCCTT
TCACGTACAAAAACACGATTAGGATCATCTAAACTTATGGTAAAGACGGTGTCTTTTTCA
GGGATTTTGAGCAACAAGGCTAAGTTTAACCCAGACTTTTACAATTGGAACAGAATTAGA
ATTAGATATTGTGATGGATCATCCTTTACTGGTGACGTTGAAGCAGTTGATCCGAAAACA
AAAGTATACTACAGAGGAGCCAGGATATTTTCAGCTGTTATGGAGGACTTCTTAGCAAAA
GGAATGAAGAACGCTCAGAATGCTATTCTAGCCGGATGTTCAGCTGGTAGTTTAGCTGCA
ATTCTACATTGTGACAGATTTAAAGGTCTCTTGCCACCGGGCGCTAAAGTAAAATGTCTT
TCAGATGCTGGTTTCTTTATCAATGCGAAGACTATTTCTGGTGCGCCTCATATTGAACAG
TTCTACAGTGATGTTGTTAACACACATGGTTCCGCGAAGAATTTGCCTCAATCATGTACC
TCAAGACTGAAACCGGGTTTGTGTTTTTTCCCACAAAATGTCGCGCAACAAATCAAGACA
CCTCTTTTCCTAGTAAATGCAGCCTATGATTCCTGGCAGATAAAGAACATTTTGGCTCCT
GGTGTTGCTGATCCTCGTGGAACCTGGCGCAATTGCAAGCTTGACATATTGAAATGCTCG
GCTGCTCAGCTCGAAACCATGCAAGGTTATAGGACCGAGTTCTTAAAAGCGTTAAACGGA
CTGGGACCATCCTCAACAAGAGGGTATTACATCAATTCCTGTTATGCACATTGTCAAACC
GGAACACAAGAGACATGGCTAAGGGATGACTCTCCGAGATTAGCTAGCACGACAATTGCC
AAAGCAGTTGGAGACTGGTTTTACGACAGAAATCGATTCCAAGAGATTGACTGTCCTTAC
CCCTGTGATAAAACCTGCAAAAACCGGAATTTTGAATCGGACGTTCAGCCAGTCGATATG
GATTTATAG

Peptide Sequence

PEP ID

XP_016442057.1
PEP Infomation

PREDICTED: pectin acetylesterase 8-like [Nicotiana tabacum]
Sequence

MVKRAMQQWLRAIITLLILLLTEGHPVDITYLQSAVAKGAVCLDGSPPAYHFDKGFGAGV
NNWFIQLEGGAWCNNATTCLSRTKTRLGSSKLMVKTVSFSGILSNKAKFNPDFYNWNRIR
IRYCDGSSFTGDVEAVDPKTKVYYRGARIFSAVMEDFLAKGMKNAQNAILAGCSAGSLAA
ILHCDRFKGLLPPGAKVKCLSDAGFFINAKTISGAPHIEQFYSDVVNTHGSAKNLPQSCT
SRLKPGLCFFPQNVAQQIKTPLFLVNAAYDSWQIKNILAPGVADPRGTWRNCKLDILKCS
AAQLETMQGYRTEFLKALNGLGPSSTRGYYINSCYAHCQTGTQETWLRDDSPRLASTTIA
KAVGDWFYDRNRFQEIDCPYPCDKTCKNRNFESDVQPVDMDL

Transcript Sequence

Gene sequence data has not been registered.